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Transcriptome analysis clarified genes involved in resistance to Phytophthora capsici in melon.

Identifieur interne : 000018 ( Main/Exploration ); précédent : 000017; suivant : 000019

Transcriptome analysis clarified genes involved in resistance to Phytophthora capsici in melon.

Auteurs : Pingyong Wang [République populaire de Chine] ; Haibo Wu [République populaire de Chine] ; Guangwei Zhao [République populaire de Chine] ; Yuhua He [République populaire de Chine] ; Weihu Kong [République populaire de Chine] ; Jian Zhang [République populaire de Chine] ; Shuimiao Liu [République populaire de Chine] ; Mengli Liu [République populaire de Chine] ; Keyun Hu [République populaire de Chine] ; Lifeng Liu [République populaire de Chine] ; Yongyang Xu [République populaire de Chine] ; Zhihong Xu [République populaire de Chine]

Source :

RBID : pubmed:32050262

Descripteurs français

English descriptors

Abstract

Phytophthora blight caused by Phytophthora capsici is a devastating disease for melon plant. However, the underlying resistance mechanisms are still poorly understood. In this study, the transcriptome differences between the resistant ZQK9 and susceptible E31 at 0, 3, and 5 days post-inoculation (dpi) were identified by RNA-seq. A total of 1,195 and 6,595 differentially expressed genes (DEGs) were identified in ZQK9 and E31, respectively. P. capsici infection triggered massive transcript changes in the inoculated tissues. Genes related to plant defense responses were activated, which was reflected by a lot of up-regulated DEGs involved in pathogenesis-related (PR) genes, hormones biosynthesis and signal transduction, secondary metabolites biosynthesis and cell wall modification in resistant ZQK9. The dataset generated in this study may provide a basis for identifying candidate resistant genes in melon against P. capsici and lay a foundation for further research on the molecular mechanisms.

DOI: 10.1371/journal.pone.0227284
PubMed: 32050262
PubMed Central: PMC7015699


Affiliations:


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Le document en format XML

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<div type="abstract" xml:lang="en">Phytophthora blight caused by Phytophthora capsici is a devastating disease for melon plant. However, the underlying resistance mechanisms are still poorly understood. In this study, the transcriptome differences between the resistant ZQK9 and susceptible E31 at 0, 3, and 5 days post-inoculation (dpi) were identified by RNA-seq. A total of 1,195 and 6,595 differentially expressed genes (DEGs) were identified in ZQK9 and E31, respectively. P. capsici infection triggered massive transcript changes in the inoculated tissues. Genes related to plant defense responses were activated, which was reflected by a lot of up-regulated DEGs involved in pathogenesis-related (PR) genes, hormones biosynthesis and signal transduction, secondary metabolites biosynthesis and cell wall modification in resistant ZQK9. The dataset generated in this study may provide a basis for identifying candidate resistant genes in melon against P. capsici and lay a foundation for further research on the molecular mechanisms.</div>
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